Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2824

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2823: 11191 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 303480 to 304770 11191 mRNA_2824: 11192 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 304875 to 305755 11192

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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303,939 - 11191 mRNA_2823 0.36 0.3
303,945 + 11191 mRNA_2823 0.36 1.9
303,952 - 11191 mRNA_2823 0.37 -0.0
303,962 + 11191 mRNA_2823 0.37 -0.0
303,964 + 11191 mRNA_2823 0.37 2.4
304,045 - 11191 mRNA_2823 0.44 -0.0
304,090 + 11191 mRNA_2823 0.47 -0.1
304,091 - 11191 mRNA_2823 0.47 1.5
304,118 - 11191 mRNA_2823 0.49 0.4
304,131 + 11191 mRNA_2823 0.50 2.1
304,134 - 11191 mRNA_2823 0.51 2.9
304,237 - 11191 mRNA_2823 0.59 1.1
304,294 - 11191 mRNA_2823 0.63 0.4
304,294 - 11191 mRNA_2823 0.63 0.7
304,300 + 11191 mRNA_2823 0.64 -0.4
304,300 + 11191 mRNA_2823 0.64 0.3
304,321 - 11191 mRNA_2823 0.65 0.7
304,386 - 11191 mRNA_2823 0.70 0.1
304,400 + 11191 mRNA_2823 0.71 0.1
304,485 - 11191 mRNA_2823 0.78 -1.7
304,526 - 11191 mRNA_2823 0.81 0.4
304,555 + 11191 mRNA_2823 0.83 0.7
304,582 + 11191 mRNA_2823 0.85 -0.9
304,832 + -0.3
304,832 + -0.7
305,177 - 11192 mRNA_2824 0.34 -0.8
305,269 - 11192 mRNA_2824 0.45 0.9
305,467 - 11192 mRNA_2824 0.67 0.2
305,590 + 11192 mRNA_2824 0.81 0.2
305,739 - -0.1
306,149 + 0.8
306,422 - 0.9
306,435 + -0.5
306,453 - -0.6
306,459 - 0.6
306,464 + -1.5
306,472 + -0.2
306,602 - 1.7
306,616 - 0.2
306,617 - -0.7
306,620 + 0.1
306,633 - 1.2
306,678 + 1.5
306,683 + 3.1
306,686 - 1.2
306,726 - 0.5
306,750 + 1.2