Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2817

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2816: 11184 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785, at 289258 to 289809 11184 mRNA_2817: 11185 - KOG2946 Uncharacterized conserved protein, at 290103 to 291394 11185 mRNA_2818: 11186 - K02178 BUB1 checkpoint serine/threonine-protein kinase, at 292080 to 296876 11186

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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289,108 - -0.2
289,182 - -0.4
289,297 + -0.1
289,468 - 11184 mRNA_2816 0.38 0.4
289,475 - 11184 mRNA_2816 0.39 1.1
289,478 - 11184 mRNA_2816 0.40 0.6
289,571 - 11184 mRNA_2816 0.57 0.1
290,294 + 11185 mRNA_2817 0.15 1.5
290,324 + 11185 mRNA_2817 0.17 -1.9
291,031 + 11185 mRNA_2817 0.72 -0.1
291,290 + 1.5
291,318 + 0.5
291,342 - -0.3
291,457 - 1.9
291,594 + -0.1
291,610 + 0.8
291,612 - 1.0
291,613 + 0.3
291,888 - -0.1
291,888 - 1.4