Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2665

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712409 to 714651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715009 to 717266 11034

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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711,440 - 0.4
711,444 + 0.5
711,473 + 1.3
711,483 - 0.5
711,483 - 0.3
711,484 + 0.8
711,486 + 0.3
711,487 - 0.2
711,495 + 0.7
711,496 + -0.3
711,500 - 1.4
711,501 - -0.2
711,505 + -0.3
711,505 + 0.6
711,507 - 0.4
711,510 - 0.4
711,520 - 1.8
711,537 + 1.7
711,541 + -0.6
711,592 + 0.3
711,605 + 0.2
711,610 - -2.1
711,623 - 1.0
711,624 - 0.5
711,631 + 0.9
711,645 + 0.6
711,655 + 1.9
711,695 + -0.7
711,734 - 1.5
711,759 + 0.0
711,770 - 1.4
711,775 - 0.3
711,775 - 0.7
711,776 + -0.1
711,779 + 2.6
711,791 + 0.3
711,801 + 0.1
711,801 - 2.2
711,803 + -0.1
711,849 - 0.7
711,922 - 2.0
712,181 - -0.4
712,205 + -1.5
712,223 - 0.4
712,301 - 0.2
712,316 + 1.3
712,338 + 1.6
712,354 - -0.0
712,362 - -0.8
712,649 - 11033 mRNA_2665 0.11 0.2
712,660 + 11033 mRNA_2665 0.11 1.0
712,765 - 11033 mRNA_2665 0.16 1.1
713,671 + 11033 mRNA_2665 0.56 -0.8
713,673 + 11033 mRNA_2665 0.56 -0.9
713,826 - 11033 mRNA_2665 0.63 1.4
714,658 + 0.1
714,969 + 0.6