Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2597

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2596: 10964 - K00966 GMPP mannose-1-phosphate guanylyltransferase, at 561715 to 563654 10964 mRNA_2597: 10965 - Hypothetical Protein, at 564104 to 565284 10965 mRNA_2598: 10966 - Hypothetical Protein, at 566184 to 566984 10966

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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563,297 + 10964 mRNA_2596 0.82 0.0
563,423 - 10964 mRNA_2596 0.88 1.5
563,572 + 0.8
563,718 - 0.0
563,736 - 0.9
563,758 + -0.1
563,821 + 0.8
563,861 + -0.8
563,866 - 0.3
563,894 - 1.8
563,894 - 0.4
563,904 + -0.5
563,915 - -0.0
563,953 - 2.1
563,991 - -0.5
564,023 + 0.1
564,037 - 0.1
564,042 - -0.5
564,064 + 1.7
564,108 + 1.5
564,200 - -0.7
564,208 - 0.2
564,209 - 1.6
564,288 - 10965 mRNA_2597 0.16 0.6
564,351 - 10965 mRNA_2597 0.21 0.2
564,355 - 10965 mRNA_2597 0.21 1.0
564,357 + 10965 mRNA_2597 0.21 -0.6
564,402 - 10965 mRNA_2597 0.25 0.1
564,481 + 10965 mRNA_2597 0.32 -0.1
564,508 + 10965 mRNA_2597 0.34 -0.9
564,780 - 10965 mRNA_2597 0.57 0.1
565,072 - 10965 mRNA_2597 0.82 -0.5
565,099 - 10965 mRNA_2597 0.84 -0.1
565,106 - 10965 mRNA_2597 0.85 -1.7
565,226 + -0.5
565,290 - -0.4
565,374 + -0.7
565,408 + 1.0
565,572 + 0.2
565,804 + 0.6
565,918 - -0.1
566,036 - -0.1
566,042 - -0.9
566,047 - -0.0
566,073 - 0.3
566,076 - 0.3
566,077 - -0.4
566,084 + -0.0
566,085 - -0.3
566,086 + -0.8
566,096 + 1.0
566,100 - 0.2
566,100 - -0.8
566,100 - 0.6
566,102 + 1.1
566,103 + 0.0
566,103 + -0.5
566,116 - 3.4
566,117 - 0.6
566,120 + 0.7
566,126 - 1.1
566,128 - -0.8
566,130 + 0.2
566,132 - -0.8
566,135 + 0.1
566,137 - 1.6
566,146 + 1.3
566,147 + -0.5
566,148 - -1.4
566,157 + 0.3
566,258 + 0.1
566,272 - 10966 mRNA_2598 0.11 0.3
566,278 + 10966 mRNA_2598 0.12 0.1