Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2559

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926 mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474 10927 mRNA_2560: 10928 - Hypothetical Protein, at 443128 to 444142 10928

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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440,370 - 10926 mRNA_2558 0.73 0.2
440,370 + 10926 mRNA_2558 0.73 0.1
440,559 + 10926 mRNA_2558 0.89 0.1
440,684 + 1.5
440,744 + 0.5
440,848 + -0.2
440,870 + 2.0
440,872 + -0.8
440,887 - 1.7
441,018 - 0.2
441,030 - -0.4
441,152 - 1.9
441,157 - 0.5
441,168 - 0.9
441,179 + 1.3
441,305 - 1.3
441,309 + 0.5
441,317 - 1.3
441,475 - 10927 mRNA_2559 0.22 0.4
441,586 - 10927 mRNA_2559 0.30 0.7
441,587 - 10927 mRNA_2559 0.30 0.7
441,602 + 10927 mRNA_2559 0.31 0.1
441,905 + 10927 mRNA_2559 0.55 2.1
442,074 + 10927 mRNA_2559 0.69 -0.9
442,679 + -0.7
442,759 - 0.2
442,765 + -0.6
442,852 - 1.2
442,983 - 1.2
443,070 + 1.3
443,223 - 0.4
443,336 - 10928 mRNA_2560 0.20 -0.4
443,388 + 10928 mRNA_2560 0.26 1.7
443,414 - 10928 mRNA_2560 0.28 -0.3