Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2551

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425175 to 426192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426245 to 427122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428082 to 428710 10920

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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425,284 - 10918 mRNA_2550 0.11 -0.5
425,287 - 10918 mRNA_2550 0.11 0.9
425,296 + 10918 mRNA_2550 0.12 0.9
425,438 - 10918 mRNA_2550 0.26 1.4
425,440 - 10918 mRNA_2550 0.26 -0.1
425,720 - 10918 mRNA_2550 0.54 1.4
425,726 + 10918 mRNA_2550 0.54 -0.5
425,981 - 10918 mRNA_2550 0.79 0.1
426,130 - 0.4
426,161 + -0.2
426,599 - 10919 mRNA_2551 0.40 0.5
426,608 + 10919 mRNA_2551 0.41 0.8
426,891 + 10919 mRNA_2551 0.74 -2.4
427,455 + 0.5
427,482 - -1.5
427,493 - 0.1
427,494 - -0.2
427,507 + 0.3
427,516 - 1.0
427,625 - 1.1
427,744 - -0.3
427,756 - 0.3
427,756 - -1.4
427,761 + -0.0
427,779 - -0.1
427,783 - 0.9
427,795 + -0.1
428,026 + 0.7
428,040 + -0.2
428,086 + -0.3
428,105 - 0.8
428,121 - 3.2