Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2542

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400071 to 401322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910 mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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401,016 + 10909 mRNA_2541 0.75 0.9
401,290 + 0.5
401,304 + 1.6
401,423 - 0.5
401,442 - -0.3
401,444 + 1.4
401,460 + -0.6
401,469 + -0.2
401,590 + 2.4
401,639 - 1.2
402,076 + 10910 mRNA_2542 0.34 1.0
402,358 - 10910 mRNA_2542 0.51 1.0
402,379 + 10910 mRNA_2542 0.52 2.1
402,792 - 10910 mRNA_2542 0.77 0.4
402,813 - 10910 mRNA_2542 0.79 0.1
402,827 + 10910 mRNA_2542 0.79 0.2
402,941 + 10910 mRNA_2542 0.86 0.0
403,062 - -0.1
403,063 + 0.4
403,069 + 1.3
403,374 + 1.1
403,396 + 1.4
403,419 + -0.7
403,633 + 10911 mRNA_2543 0.19 -0.4
403,640 + 10911 mRNA_2543 0.20 -0.2
404,000 - 10911 mRNA_2543 0.55 -1.2