Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2539

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2538: 10906 - SUPERFAMILY--SSF56112, at 393822 to 395821 10906 mRNA_2539: 10907 - Hypothetical Protein, at 396094 to 398437 10907 mRNA_2540: 10908 - SUPERFAMILY--SSF52058, at 398635 to 399613 10908

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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395,138 - 10906 mRNA_2538 0.66 2.0
395,441 + 10906 mRNA_2538 0.81 0.8
395,554 - 10906 mRNA_2538 0.87 2.0
395,578 + 10906 mRNA_2538 0.88 -1.9
395,600 + 10906 mRNA_2538 0.89 0.1
395,608 + 10906 mRNA_2538 0.89 1.2
395,610 - 10906 mRNA_2538 0.89 -0.1
395,747 + 0.9
395,794 + -0.5
395,926 + -0.4
396,024 + -0.2
396,048 - -1.0
396,172 + -0.3
396,180 - 0.4
396,196 - -1.8
396,196 - -0.4
396,208 + 0.2
396,367 + 10907 mRNA_2539 0.12 0.5
396,464 + 10907 mRNA_2539 0.16 0.1
396,528 + 10907 mRNA_2539 0.19 -0.8
396,871 + 10907 mRNA_2539 0.33 -0.5
396,917 - 10907 mRNA_2539 0.35 0.6
396,951 - 10907 mRNA_2539 0.37 -0.9
397,022 + 10907 mRNA_2539 0.40 -1.0
397,658 + 10907 mRNA_2539 0.67 -0.1
397,921 + 10907 mRNA_2539 0.78 -0.3
397,927 + 10907 mRNA_2539 0.78 -0.5
398,070 + 10907 mRNA_2539 0.84 -1.5
398,075 - 10907 mRNA_2539 0.85 0.6
398,288 + 2.8
398,364 + 0.1
398,406 - 0.3
398,515 + 0.6
398,515 + -0.0
398,618 + 2.4
398,635 - 0.6
398,792 + 10908 mRNA_2540 0.16 0.2
398,798 - 10908 mRNA_2540 0.17 0.9
398,846 - 10908 mRNA_2540 0.22 -0.3
398,867 - 10908 mRNA_2540 0.24 1.5
398,908 - 10908 mRNA_2540 0.28 1.8
398,949 - 10908 mRNA_2540 0.32 -3.2
399,077 - 10908 mRNA_2540 0.45 -0.1
399,265 - 10908 mRNA_2540 0.64 -0.0
399,380 - 10908 mRNA_2540 0.76 -0.4
399,434 + 10908 mRNA_2540 0.82 2.6