Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2506

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2505: 10873 - KOG3299 Uncharacterized conserved protein, at 311631 to 312608 10873 mRNA_2506: 10874 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 312607 to 314311 10874 mRNA_2507: 10875 - K11232 YPD1 osomolarity two-component system, phosphorelay intermediate protein YPD1, at 314960 to 315808 10875

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
311,620 - 0.4
311,769 + 10873 mRNA_2505 0.14 -0.2
312,350 - 10873 mRNA_2505 0.74 1.1
312,469 + 10873 mRNA_2505 0.86 -0.0
312,584 - 0.7
312,605 - 1.2
312,607 + 0.5
312,636 + 0.1
312,640 - 0.9
312,778 + 10874 mRNA_2506 0.10 0.1
312,784 + 10874 mRNA_2506 0.10 1.2
312,784 - 10874 mRNA_2506 0.10 1.6
312,791 + 10874 mRNA_2506 0.11 1.4
313,047 - 10874 mRNA_2506 0.26 0.6
313,071 - 10874 mRNA_2506 0.27 -1.0
313,083 - 10874 mRNA_2506 0.28 0.6
313,245 - 10874 mRNA_2506 0.37 0.4
313,333 - 10874 mRNA_2506 0.43 -0.2
313,363 - 10874 mRNA_2506 0.44 0.1
313,381 + 10874 mRNA_2506 0.45 -0.8
313,388 + 10874 mRNA_2506 0.46 0.7
313,409 + 10874 mRNA_2506 0.47 0.2
313,525 + 10874 mRNA_2506 0.54 -0.3
313,526 - 10874 mRNA_2506 0.54 0.8
313,671 + 10874 mRNA_2506 0.62 1.1
313,845 + 10874 mRNA_2506 0.73 0.0
313,849 - 10874 mRNA_2506 0.73 0.5
313,873 + 10874 mRNA_2506 0.74 -0.6
313,944 + 10874 mRNA_2506 0.78 0.3
314,005 + 10874 mRNA_2506 0.82 -0.4
314,092 - 10874 mRNA_2506 0.87 -0.3
314,098 - 10874 mRNA_2506 0.87 0.9
314,119 - 10874 mRNA_2506 0.89 1.1
314,124 - 10874 mRNA_2506 0.89 0.9
314,250 - 1.7
314,256 - 0.6
314,272 + 1.3
314,339 + 1.6
314,380 - -1.3
314,391 + 0.1
314,394 + -1.2
314,496 + 1.0
314,509 + 1.8
314,520 - -2.5
314,536 - 0.7
314,541 - 2.0
314,541 - 0.0
314,546 - -0.0
314,546 - 2.7
314,546 + 1.3
314,550 + 2.2
314,553 - -0.1
314,617 + 0.9
314,673 - -0.4
314,674 + 2.0
314,679 + 0.6
314,685 - 0.9
314,689 + 0.8
314,696 + 0.7
314,708 + 0.3
314,723 + 1.8
314,739 + 0.9