Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2468

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2468: 10836 - HMMPfam-Protein of unknown function (DUF3605)-PF12239, at 219439 to 220603 10836 mRNA_2469: 10837 - K12479 VPS45 vacuolar protein sorting-associated protein 45, at 220878 to 223726 10837

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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218,456 + 0.5
218,482 - 0.1
218,506 + -2.0
218,507 - -0.8
218,561 + 1.1
218,561 + 2.0
218,570 + 2.1
218,573 + -0.1
218,594 + 0.3
218,609 - 1.1
218,642 - 0.2
218,651 + -0.3
218,657 - 0.4
218,659 + -0.0
218,671 - 1.7
218,677 - 1.4
218,747 - -0.6
218,766 - 0.8
218,788 - -0.1
218,794 - 1.6
218,802 + 0.4
218,817 - 0.5
218,830 + 0.9
218,924 - 0.4
218,926 + 0.3
218,947 - 0.4
218,951 - 1.8
218,952 - -0.6
218,954 - -1.1
218,961 - 0.2
218,962 - 0.1
218,969 + 1.0
219,087 - -0.5
219,229 - 0.3
219,239 - -0.5
219,260 + -0.4
219,260 + -0.1
219,260 + 0.3
219,264 - -0.0
219,369 + -0.5
219,373 + 0.6
219,387 - -0.3
219,393 + 0.6
219,402 + -0.2
219,946 - 10836 mRNA_2468 0.44 0.8
220,084 + 10836 mRNA_2468 0.55 0.9
220,375 - 10836 mRNA_2468 0.80 -0.0
220,391 - 10836 mRNA_2468 0.82 0.4
220,498 - -0.7
220,539 + -0.4
220,608 - 1.0
220,650 - -0.5
220,651 + -0.2
220,823 + 0.0
220,995 - 1.4