Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2398

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2397: 10765 - Hypothetical Protein, at 21326 to 23910 10765 mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24008 to 25280 10766 mRNA_2399: 10767 - Hypothetical Protein, at 25510 to 29581 10767

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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23,076 - 10765 mRNA_2397 0.68 1.4
23,087 - 10765 mRNA_2397 0.68 0.8
23,205 - 10765 mRNA_2397 0.73 0.4
23,224 - 10765 mRNA_2397 0.73 0.6
23,495 - 10765 mRNA_2397 0.84 0.7
23,667 - 0.4
23,682 + -2.0
23,780 - 0.9
23,789 + 0.4
23,790 + -0.1
23,814 + -0.0
23,941 - 0.3
23,953 + 3.8
23,955 + 0.2
24,014 + -0.5
24,021 + 0.3
24,121 + 1.0
24,133 - 0.3
24,145 + 10766 mRNA_2398 0.11 -0.1
24,169 - 10766 mRNA_2398 0.13 -1.2
24,440 - 10766 mRNA_2398 0.34 -0.7
24,579 - 10766 mRNA_2398 0.45 -0.9
24,581 - 10766 mRNA_2398 0.45 -0.9
24,720 - 10766 mRNA_2398 0.56 1.3
24,750 + 10766 mRNA_2398 0.58 0.5
24,773 + 10766 mRNA_2398 0.60 -0.1
24,856 - 10766 mRNA_2398 0.67 -0.2
24,895 + 10766 mRNA_2398 0.70 0.4
24,895 + 10766 mRNA_2398 0.70 0.4
25,005 - 10766 mRNA_2398 0.78 1.4
25,028 + 10766 mRNA_2398 0.80 1.3
25,164 + 0.1
25,306 + -0.6
25,422 + 1.6
25,454 - 0.1
25,493 - 0.0
25,693 + -0.1
25,696 - -0.3
25,750 - -0.0
25,857 + 1.9
26,023 + 10767 mRNA_2399 0.13 1.2