Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2390

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2389: 10757 - K10901 BLM, RECQL3, SGS1 bloom syndrome protein, at 4587 to 7344 10757 mRNA_2390: 10758 - Hypothetical Protein, at 8054 to 9276 10758 mRNA_2391: 10759 - HMMPfam-Chaperone for protein-folding within the ER, fungal-PF10681, at 9601 to 10907 10759

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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7,171 - 0.7
7,187 - -0.2
7,191 + -0.7
7,214 + -0.2
7,310 + 0.4
7,337 + 1.4
7,360 + 0.9
7,820 - 1.3
8,472 - 10758 mRNA_2390 0.34 0.3
8,619 + 10758 mRNA_2390 0.46 -1.7
8,619 + 10758 mRNA_2390 0.46 -0.6
8,903 + 10758 mRNA_2390 0.69 0.4
9,046 + 10758 mRNA_2390 0.81 0.5
9,171 - 1.0
9,179 - 0.4
9,181 - -1.3
9,320 - 0.2
9,327 - 0.4
9,329 + -0.1
9,427 - 0.6
9,522 - -0.3
9,525 - 1.9
9,525 + -0.3
9,540 - -0.1