Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2386

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2385: 10753 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 765791 to 769298 10753 mRNA_2386: 10754 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 769770 to 774280 10754 mRNA_2387: 10755 - K17781 TIM13 mitochondrial import inner membrane translocase subunit TIM13, at 774477 to 775750 10755

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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769,065 - 0.1
769,553 - 0.6
769,575 - 0.3
769,576 + 1.5
769,618 + 1.7
769,619 + 1.5
769,751 + 0.9
769,751 + 3.5
769,755 + 1.0
770,055 + 2.4
770,191 - 2.2
770,788 - 10754 mRNA_2386 0.23 1.9
771,048 + 10754 mRNA_2386 0.28 0.2
771,095 - 10754 mRNA_2386 0.29 2.6
771,936 + 10754 mRNA_2386 0.48 2.5
772,531 - 10754 mRNA_2386 0.61 3.0
772,534 - 10754 mRNA_2386 0.61 -2.1
773,378 + 10754 mRNA_2386 0.80 3.0
773,553 + 10754 mRNA_2386 0.84 1.2
773,580 + 10754 mRNA_2386 0.84 0.4
774,285 - 0.9
774,323 + 1.9
774,501 + -0.9
774,883 - 10755 mRNA_2387 0.32 -1.5
774,884 + 10755 mRNA_2387 0.32 0.2
775,177 - 10755 mRNA_2387 0.55 0.7
775,260 + 10755 mRNA_2387 0.61 1.4