Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2342

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2341: 10709 - K03021 RPC2, POLR3B DNA-directed RNA polymerase III subunit RPC2, at 663077 to 667244 10709 mRNA_2342: 10710 - Hypothetical Protein, at 667459 to 669644 10710 mRNA_2343: 10711 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 669815 to 670967 10711

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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667,532 - -1.0
667,551 - -1.8
667,673 + 1.1
667,692 - 10710 mRNA_2342 0.11 2.0
667,712 - 10710 mRNA_2342 0.12 0.7
667,715 + 10710 mRNA_2342 0.12 -0.5
667,721 + 10710 mRNA_2342 0.12 0.5
667,729 - 10710 mRNA_2342 0.12 1.1
667,799 - 10710 mRNA_2342 0.16 0.9
667,846 - 10710 mRNA_2342 0.18 1.3
667,965 - 10710 mRNA_2342 0.23 -0.1
667,976 + 10710 mRNA_2342 0.24 0.5
667,994 - 10710 mRNA_2342 0.24 -0.0
668,273 - 10710 mRNA_2342 0.37 -0.3
668,282 + 10710 mRNA_2342 0.38 -0.8
668,559 + 10710 mRNA_2342 0.50 0.2
669,314 - 10710 mRNA_2342 0.85 0.1
669,337 - 10710 mRNA_2342 0.86 1.3
669,450 - 1.1
669,693 + 0.5
670,027 - 10711 mRNA_2343 0.18 -1.6
670,315 + 10711 mRNA_2343 0.43 0.6
670,592 + 10711 mRNA_2343 0.67 0.0