Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2314

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2313: 10681 - K13343 PEX14 peroxin-14, at 584223 to 585492 10681 mRNA_2314: 10682 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 585676 to 588935 10682 mRNA_2315: 10683 - SUPERFAMILY--SSF160369, at 589518 to 590435 10683

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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585,569 - 1.3
585,573 - 0.6
585,577 - -0.9
585,578 - -0.4
585,591 - 0.9
585,591 + 1.2
585,592 + 1.5
585,653 - 0.2
585,653 - 1.1
585,662 - 1.0
585,668 - 0.9
585,774 + 0.7
585,783 + 1.5
585,853 - -0.6
585,934 + 0.4
585,948 - 0.3
586,508 + 10682 mRNA_2314 0.26 0.2
586,510 - 10682 mRNA_2314 0.26 0.2
586,650 + 10682 mRNA_2314 0.30 3.3
586,789 - 10682 mRNA_2314 0.34 0.1
586,981 + 10682 mRNA_2314 0.40 -1.4
587,101 - 10682 mRNA_2314 0.44 -0.2
587,147 + 10682 mRNA_2314 0.45 2.0
587,278 + 10682 mRNA_2314 0.49 -0.6
587,356 - 10682 mRNA_2314 0.52 0.1
587,423 - 10682 mRNA_2314 0.54 -0.5
587,696 - 10682 mRNA_2314 0.62 -0.8
587,712 + 10682 mRNA_2314 0.62 0.0
587,817 - 10682 mRNA_2314 0.66 -0.1
587,843 + 10682 mRNA_2314 0.66 2.4
587,899 + 10682 mRNA_2314 0.68 2.0
588,150 - 10682 mRNA_2314 0.76 1.9
588,335 - 10682 mRNA_2314 0.82 1.8
588,555 - 10682 mRNA_2314 0.88 -0.1
588,698 - -0.3
588,858 + 0.1
589,011 - 0.4
589,026 + 2.7
589,036 + 1.6
589,037 + -0.0
589,042 + 1.4
589,165 - 2.6
589,189 + 0.8
589,340 + 0.3
589,482 + -0.5