Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2303

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2302: 10670 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 563015 to 564806 10670 mRNA_2303: 10671 - Hypothetical Protein, at 565712 to 566657 10671 mRNA_2304: 10672 - Hypothetical Protein, at 567046 to 568484 10672

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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564,716 + 0.0
564,717 + 0.1
564,725 + 0.7
564,763 - -2.2
564,862 + 0.8
564,863 + 0.1
564,867 + 1.7
564,870 + 0.7
564,875 - -0.0
564,886 - 1.9
564,892 + -0.6
564,982 + -0.1
564,987 - 0.9
564,989 + -0.6
564,996 - -0.9
564,997 + -0.8
564,998 - 0.9
565,002 + 0.0
565,009 + -0.5
565,109 - 0.1
565,134 + -0.3
565,136 + 0.0
565,162 + -1.0
565,181 + 0.7
565,188 - 0.1
565,194 + -3.8
565,194 + 0.4
565,207 + -0.1
565,223 + 1.4
565,315 + 0.1
565,316 + 1.1
565,327 - 0.6
565,333 - -1.2
565,339 + 0.5
565,360 - 1.0
565,377 - -1.1
565,388 + 0.0
565,390 - 0.1
565,391 + -0.1
565,395 - 0.5
565,405 + 0.2
565,408 + -0.3
565,416 - 0.5
565,416 + -0.4
565,427 - 1.9
565,432 - 0.7
565,433 + 2.5
565,456 + -0.4
565,561 - -0.9
565,601 + -2.7
566,216 + 10671 mRNA_2303 0.53 1.0
566,359 + 10671 mRNA_2303 0.68 -0.1
566,486 - 10671 mRNA_2303 0.82 0.2
566,630 + 0.3
566,763 - 0.2
566,765 - 2.0
566,765 - 0.2
566,891 - 0.5
567,210 - 10672 mRNA_2304 0.11 -0.3
567,228 - 10672 mRNA_2304 0.13 -0.1
567,358 - 10672 mRNA_2304 0.22 -0.5
567,513 + 10672 mRNA_2304 0.32 0.4
567,526 + 10672 mRNA_2304 0.33 1.0