Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2300

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2299: 10667 - Hypothetical Protein, at 557055 to 559337 10667 mRNA_2300: 10668 - Hypothetical Protein, at 559511 to 559996 10668 mRNA_2301: 10669 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 560287 to 562676 10669

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
558,835 - 10667 mRNA_2299 0.78 0.0
558,843 - 10667 mRNA_2299 0.78 0.9
559,141 + 0.7
559,143 - 0.4
559,301 - -0.4
559,407 - -0.1
559,427 + 0.6
559,440 - -0.1
559,446 - 0.4
559,600 + 10668 mRNA_2300 0.18 0.5
559,618 + 10668 mRNA_2300 0.22 0.7
559,637 + 10668 mRNA_2300 0.26 -2.6
559,743 + 10668 mRNA_2300 0.48 -0.6
559,772 - 10668 mRNA_2300 0.54 0.3
559,806 + 10668 mRNA_2300 0.61 0.1
559,869 - 10668 mRNA_2300 0.74 0.6
559,885 - 10668 mRNA_2300 0.77 -0.5
559,895 - 10668 mRNA_2300 0.79 1.2
559,901 + 10668 mRNA_2300 0.80 0.2
559,931 + 10668 mRNA_2300 0.86 -0.1
559,936 + 10668 mRNA_2300 0.87 0.1
559,936 + 10668 mRNA_2300 0.87 0.2
559,936 - 10668 mRNA_2300 0.87 0.4
559,952 - 0.9
559,958 - -0.2
559,977 + -0.1
560,041 + 1.6
560,066 - -0.1
560,093 + -0.9
560,149 - -0.2
560,156 + -0.4
560,158 + 1.1
560,178 + 1.9
560,247 + 1.8
560,356 - 0.0
560,371 - -1.1
560,377 - 0.6
560,381 - 0.5
560,382 + -0.1
560,384 + -1.2
560,529 + 10669 mRNA_2301 0.10 1.2