Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2067

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2066: 10434 - SUPERFAMILY--SSF52047, at 867605 to 868583 10434 mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435 mRNA_2068: 10436 - Hypothetical Protein, at 869923 to 870194 10436

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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867,991 - 10434 mRNA_2066 0.39 -1.1
868,059 - 10434 mRNA_2066 0.46 -0.4
868,066 + 10434 mRNA_2066 0.47 0.5
868,214 + 10434 mRNA_2066 0.62 0.9
868,253 - 10434 mRNA_2066 0.66 -0.3
868,298 - 10434 mRNA_2066 0.71 -0.4
868,342 - 10434 mRNA_2066 0.75 1.5
868,390 - 10434 mRNA_2066 0.80 -1.1
868,493 - 0.3
868,501 + 0.9
868,534 + -3.1
868,534 + -1.1
868,555 - 0.8
868,625 - 0.1
868,626 - 0.5
868,645 - 1.2
868,712 - 0.4
868,813 - -0.1
868,875 - 1.6
868,932 - 0.2
868,957 - -0.6
868,974 + 1.1
868,980 - 1.3
868,983 - 0.3
869,027 - 0.8
869,097 + 10435 mRNA_2067 0.17 1.9
869,174 + 10435 mRNA_2067 0.27 1.4
869,210 - 10435 mRNA_2067 0.31 1.1
869,232 + 10435 mRNA_2067 0.34 0.2
869,239 - 10435 mRNA_2067 0.35 -0.2
869,248 - 10435 mRNA_2067 0.36 -0.7
869,360 - 10435 mRNA_2067 0.50 -0.3
869,379 - 10435 mRNA_2067 0.53 -0.3
869,379 - 10435 mRNA_2067 0.53 0.4
869,385 + 10435 mRNA_2067 0.53 -0.6
869,405 - 10435 mRNA_2067 0.56 0.2
869,405 - 10435 mRNA_2067 0.56 -0.6
869,406 + 10435 mRNA_2067 0.56 -1.0
869,493 - 10435 mRNA_2067 0.67 -0.6
869,524 - 10435 mRNA_2067 0.71 0.1
869,540 - 10435 mRNA_2067 0.73 0.0
869,591 - 10435 mRNA_2067 0.80 -1.2
869,620 - 10435 mRNA_2067 0.83 1.0
869,624 - 10435 mRNA_2067 0.84 -1.6
869,629 - 10435 mRNA_2067 0.84 1.9
869,641 - 10435 mRNA_2067 0.86 0.1
869,651 - 10435 mRNA_2067 0.87 1.1
869,689 - 0.2
869,714 + 0.4
869,721 - 0.8
869,758 - 1.0
869,758 + -0.4
869,771 - 0.4
869,775 - 1.6
869,795 - 0.1
869,864 - -0.1
869,866 - 0.3
869,877 - 1.6
869,881 - 0.2
869,903 - 0.7
869,904 - 0.3
869,908 - 1.1
869,923 - -0.1
869,942 - 0.4
869,943 - 0.6
869,948 - 0.3
869,964 + 10436 mRNA_2068 0.15 0.2
869,966 - 10436 mRNA_2068 0.16 1.3
869,990 + 10436 mRNA_2068 0.25 0.7
869,990 + 10436 mRNA_2068 0.25 1.0
869,990 - 10436 mRNA_2068 0.25 -0.8
870,004 - 10436 mRNA_2068 0.30 1.0
870,012 + 10436 mRNA_2068 0.33 0.4
870,033 - 10436 mRNA_2068 0.40 -0.4
870,035 - 10436 mRNA_2068 0.41 0.2
870,042 - 10436 mRNA_2068 0.44 0.8
870,044 + 10436 mRNA_2068 0.44 -0.4
870,054 + 10436 mRNA_2068 0.48 0.9
870,056 - 10436 mRNA_2068 0.49 2.2
870,058 - 10436 mRNA_2068 0.50 0.3
870,061 - 10436 mRNA_2068 0.51 1.3
870,070 - 10436 mRNA_2068 0.54 -1.5
870,086 - 10436 mRNA_2068 0.60 -0.8
870,086 - 10436 mRNA_2068 0.60 -0.3
870,093 + 10436 mRNA_2068 0.62 1.0
870,107 - 10436 mRNA_2068 0.68 0.9
870,112 + 10436 mRNA_2068 0.69 -1.8
870,127 - 10436 mRNA_2068 0.75 1.0
870,145 - 10436 mRNA_2068 0.82 0.2
870,148 - 10436 mRNA_2068 0.83 1.2
870,158 - 10436 mRNA_2068 0.86 -0.3
870,171 + -1.3
870,172 - -0.9
870,172 - 0.2
870,172 - 1.0
870,172 - -2.2
870,173 + 0.3
870,173 + -0.9
870,176 - -1.1
870,180 - 0.1
870,192 - 0.7
870,205 - 0.9
870,210 - -0.0
870,210 - 0.8
870,210 - -1.3
870,210 - -0.2
870,210 - 0.1