Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1971

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1971: 10339 - K02429 fucP MFS transporter, FHS family, L-fucose permease, at 642692 to 644646 10339 mRNA_1972: 10340 - K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2, at 645186 to 645812 10340

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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641,693 - -1.0
641,693 - 0.7
641,698 + -0.3
641,702 + 0.6
641,703 - 1.0
641,707 + 0.1
641,708 + 0.7
641,711 - 0.6
641,763 - -1.3
641,769 + -2.0
641,803 + 1.3
641,815 + -1.0
641,831 - -1.2
641,854 - -0.2
641,865 - 0.2
641,887 - 0.5
641,904 + 1.0
641,908 - -0.3
641,946 - -0.2
641,949 + 1.7
641,971 - 1.0
641,988 + -0.1
641,995 + 0.3
641,996 + -0.2
642,001 + 1.7
642,019 - 1.6
642,026 - 0.8
642,027 - 0.0
642,033 - 1.4
642,037 + 0.4
642,037 - 0.8
642,039 + -2.2
642,049 + 3.2
642,071 + 0.2
642,091 - -1.2
642,092 + 0.3
642,174 - 0.5
642,188 - 0.6
642,189 + 1.1
642,190 + -0.0
642,198 - 0.5
642,204 + -1.8
642,208 + -2.5
642,209 - -0.7
642,217 + 0.7
642,220 + -3.2
642,222 + 0.2
642,229 + 1.1
642,248 - 0.1
642,279 - -1.0
642,294 - -0.1
642,296 - 0.7
642,301 - 0.4
642,307 + 0.6
642,319 + 0.1
642,331 + 0.3
642,339 + -0.0
642,344 - -0.0
642,349 + -0.6
642,359 - 2.2
642,367 - 0.6
642,379 - -0.5
642,381 + -0.0
642,385 + 0.2
642,390 + 0.6
642,393 - 3.1
642,396 + 1.7
642,396 - 1.3
642,407 - 0.2
642,411 - 0.3
642,419 + -0.5
642,426 - 0.6
642,436 - 2.5
642,441 + 0.0
642,445 - 0.6
642,448 - 2.2
642,452 + 0.3
642,453 - 1.6
642,490 + 1.4
642,550 - 0.6
642,579 + 0.1
642,610 - 1.8
642,931 - 10339 mRNA_1971 0.12 -0.4
643,292 + 10339 mRNA_1971 0.31 2.0
643,761 - 10339 mRNA_1971 0.55 -1.3
643,783 - 10339 mRNA_1971 0.56 -0.5
644,298 - 10339 mRNA_1971 0.82 0.9
644,317 + 10339 mRNA_1971 0.83 0.8