Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1969

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1968: 10336 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 633859 to 635339 10336 mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635638 to 637721 10337 mRNA_1970: 10338 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 638087 to 640268 10338

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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634,825 - 10336 mRNA_1968 0.65 -0.8
635,258 - -1.8
635,420 + -0.1
635,511 - -0.5
635,532 - 1.2
635,546 - -0.3
635,559 + 1.0
635,705 + 0.2
635,848 - 10337 mRNA_1969 0.10 1.9
636,142 - 10337 mRNA_1969 0.24 1.3
637,606 - -1.0
637,873 - 1.6
637,896 - 0.4
637,905 - 1.2
638,024 - -0.6
638,144 - -2.0
638,189 + -0.3
638,460 + 10338 mRNA_1970 0.17 1.9
638,461 + 10338 mRNA_1970 0.17 -0.5
638,658 + 10338 mRNA_1970 0.26 0.4