Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1951

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1950: 10318 - K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9, at 586825 to 587644 10318 mRNA_1951: 10319 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 588151 to 591426 10319 mRNA_1952: 10320 - K14564 NOP56 nucleolar protein 56, at 591804 to 593975 10320

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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587,720 + 0.6
587,720 + 0.5
587,775 - -0.3
587,790 - 1.7
587,943 + 0.6
587,948 + 0.2
587,951 - 1.1
587,960 - 0.2
587,983 - -0.8
587,994 - 0.9
588,067 - 2.9
588,115 + 0.6
588,283 - -0.3
589,895 - 10319 mRNA_1951 0.53 0.2
591,329 + 1.1