Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1772

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163525 to 168544 10139 mRNA_1772: 10140 - K01480 speB agmatinase, at 169490 to 170600 10140 mRNA_1773: 10141 - Hypothetical Protein, at 171350 to 172928 10141

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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168,629 - 0.1
168,765 - -0.4
168,830 - 1.5
169,061 - -1.4
169,061 - -0.1
169,067 + -0.1
169,067 + -0.7
169,100 - 0.5
169,374 - 2.0
169,457 - -0.0
169,636 - 10140 mRNA_1772 0.13 0.6
169,931 - 10140 mRNA_1772 0.40 0.4
169,968 + 10140 mRNA_1772 0.43 0.5
170,010 - 10140 mRNA_1772 0.47 1.2
170,066 + 10140 mRNA_1772 0.52 1.1
170,357 - 10140 mRNA_1772 0.78 0.2
170,361 - 10140 mRNA_1772 0.78 -0.7
170,521 - 0.3
170,664 - -0.4
170,686 + 0.4
170,820 + 1.2
170,824 + 0.2
170,827 - 0.8
170,837 - 0.0
170,847 - 0.5
170,971 - 0.9
171,115 + 0.1
171,231 - 0.4
171,239 + -0.2
171,240 - 0.3
171,280 + 0.8
171,414 - 0.3