Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1722

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32428 to 34334 10089 mRNA_1722: 10090 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 34875 to 37390 10090

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
34,606 + 0.0
34,704 + 0.5
34,710 + 1.3
34,717 + 0.1
34,753 - 1.2
34,868 + 0.7
34,948 - -1.0
35,013 - 2.2
35,040 + 1.0
35,159 - 10090 mRNA_1722 0.11 0.0
35,168 + 10090 mRNA_1722 0.12 -0.4
35,466 + 10090 mRNA_1722 0.23 -0.4
35,672 + 10090 mRNA_1722 0.32 0.2
35,841 + 10090 mRNA_1722 0.38 0.7
36,014 + 10090 mRNA_1722 0.45 0.0
36,174 - 10090 mRNA_1722 0.52 0.4
36,204 + 10090 mRNA_1722 0.53 0.3
36,285 + 10090 mRNA_1722 0.56 0.3
36,292 + 10090 mRNA_1722 0.56 -0.2
36,324 + 10090 mRNA_1722 0.58 0.2
36,375 + 10090 mRNA_1722 0.60 0.4
36,465 + 10090 mRNA_1722 0.63 -0.3
36,602 + 10090 mRNA_1722 0.69 1.1
36,611 + 10090 mRNA_1722 0.69 0.1
36,720 - 10090 mRNA_1722 0.73 -0.8
36,746 + 10090 mRNA_1722 0.74 0.1
36,965 + 10090 mRNA_1722 0.83 -1.8
37,032 - 10090 mRNA_1722 0.86 0.9
37,050 - 10090 mRNA_1722 0.86 1.5
37,145 + -0.1
37,166 + 1.6
37,194 - -0.4
37,194 + 0.5
37,356 + -0.5
37,457 + 0.7
37,470 + 0.2
37,473 + 1.1
37,476 + 0.8
37,481 + 0.1
37,501 + 2.6
37,595 + -1.5
37,628 + 0.7
37,631 + 0.4
37,660 + -0.5
37,703 - 0.2
37,717 - 0.5
37,735 - 0.4
37,831 - 0.7
37,837 + 0.1
37,921 - 0.2
37,933 - 0.2
37,934 + -0.3
37,934 + -0.5
37,938 + -1.0
37,950 - 0.8
37,951 + 1.1
37,984 - 0.3
38,063 + 1.1
38,063 - 1.0
38,074 - -0.1
38,075 - -1.5
38,083 + -0.1
38,091 - -0.5
38,140 - 0.5
38,248 - 0.3
38,249 - 0.4
38,366 + 0.3
38,384 + 2.5