Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1582

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1581: 9949 - HMMPfam-Protein of unknown function (DUF3759)-PF12585, at 651787 to 652843 9949 mRNA_1582: 9950 - K01381 PEP4 saccharopepsin, at 653441 to 655468 9950 mRNA_1583: 9951 - HMMPfam-Mediator complex protein-PF10280, at 655631 to 656397 9951

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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653,037 - 0.3
653,309 - 0.1
653,356 + 1.5
654,376 + 9950 mRNA_1582 0.46 -3.0
654,905 - 9950 mRNA_1582 0.72 -2.2
654,910 + 9950 mRNA_1582 0.72 -0.9
655,212 - 9950 mRNA_1582 0.87 -1.4
655,494 + -1.4
655,502 + -2.4
655,505 + 0.4
655,534 + -1.9
655,718 + 9951 mRNA_1583 0.11 0.8