Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1538

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1537: 9905 - K05284 PIGM phosphatidylinositol glycan, class M, at 537720 to 539172 9905 mRNA_1538: 9906 - K20307 TRAPPC10, TRS130 trafficking protein particle complex subunit 10, at 539427 to 544024 9906 mRNA_1539: 9907 - K13617 PPME1 protein phosphatase methylesterase 1, at 544104 to 545858 9907

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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538,679 + 9905 mRNA_1537 0.66 -0.3
539,181 - -0.4
539,181 - 0.6
539,181 - 0.5
539,183 + 0.1
539,186 + -0.3
539,191 - -1.1
539,201 - 0.4
539,203 - 2.9
539,208 - 1.0
539,353 + -0.9
539,359 - 0.4
539,359 - 0.5
543,529 - 9906 mRNA_1538 0.89 1.6
543,669 - -0.3
544,146 + -0.1
544,421 - 9907 mRNA_1539 0.18 -0.1
544,862 - 9907 mRNA_1539 0.43 0.3