Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1488

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1487: 9855 - K01883 CARS, cysS cysteinyl-tRNA synthetase, at 420051 to 423071 9855 mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423330 to 427670 9856 mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428243 to 429095 9857

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
423,352 - -0.6
423,472 - -0.6
423,604 - 0.9
423,724 - 0.2
423,778 + 9856 mRNA_1488 0.10 0.2
423,835 + 9856 mRNA_1488 0.12 -0.7
424,172 + 9856 mRNA_1488 0.19 -1.0
424,221 - 9856 mRNA_1488 0.21 0.7
424,416 - 9856 mRNA_1488 0.25 -0.7
424,520 + 9856 mRNA_1488 0.27 0.7
424,601 + 9856 mRNA_1488 0.29 1.0
424,906 - 9856 mRNA_1488 0.36 0.6
425,060 + 9856 mRNA_1488 0.40 0.2
425,061 - 9856 mRNA_1488 0.40 0.5
425,496 + 9856 mRNA_1488 0.50 -0.6
425,697 + 9856 mRNA_1488 0.55 1.1
425,708 - 9856 mRNA_1488 0.55 1.6
425,820 + 9856 mRNA_1488 0.57 -2.4
425,823 - 9856 mRNA_1488 0.57 -1.7
426,112 - 9856 mRNA_1488 0.64 0.6
426,517 - 9856 mRNA_1488 0.73 0.8
426,649 - 9856 mRNA_1488 0.76 0.6
427,144 - 9856 mRNA_1488 0.88 0.4
427,153 + 9856 mRNA_1488 0.88 -0.4
427,159 + 9856 mRNA_1488 0.88 -1.1
427,238 - 1.6
427,238 + 0.1
427,239 + -0.1
427,263 + -0.2
427,264 - 0.8
427,264 + 0.3
427,282 + 0.4
427,291 + 0.6
427,426 + 1.7
427,438 + -0.6
427,438 - 1.5
427,455 - 0.8
427,468 + 1.6
427,518 + 0.1
427,544 - 0.9
427,575 + -0.0
427,576 - -1.2
427,580 + -1.0
427,598 + -0.7
427,703 - -0.2
427,719 - 0.8
427,725 - 2.1
427,730 - 0.2
427,730 - -2.1
427,746 - 1.9
427,766 - -0.3
427,766 + -0.7
427,773 + 0.7
427,774 + 1.4
427,907 - 1.9
427,948 + -1.4
427,949 + 2.3
427,952 + 0.3
427,991 + -2.9
428,272 + -1.0
428,361 - 9857 mRNA_1489 0.14 0.5
428,405 + 9857 mRNA_1489 0.19 -0.5
428,499 + 9857 mRNA_1489 0.30 -0.5