Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1487

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1486: 9854 - K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA, at 414021 to 419409 9854 mRNA_1487: 9855 - K01883 CARS, cysS cysteinyl-tRNA synthetase, at 420051 to 423071 9855 mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423330 to 427670 9856

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
419,060 + 1.3
419,064 - 0.5
419,129 - 0.8
419,222 + 0.8
419,388 - 1.5
419,393 + -0.3
419,479 - -0.4
419,488 + 1.6
419,532 - 1.9
419,537 - 2.1
419,545 + -1.1
419,682 - 0.5
419,702 + 1.3
419,785 + 0.1
419,840 + -0.2
421,622 + 9855 mRNA_1487 0.52 0.6
423,352 - -0.6
423,472 - -0.6
423,604 - 0.9
423,724 - 0.2
423,778 + 9856 mRNA_1488 0.10 0.2
423,835 + 9856 mRNA_1488 0.12 -0.7