Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1444

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1444: 9812 - KOG4173 Alpha-SNAP protein, at 294219 to 295156 9812 mRNA_1445: 9813 - K20045 ITSN intersectin, at 295295 to 301799 9813

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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293,270 + 0.7
293,273 - -0.8
293,279 - 2.2
293,282 - -0.3
293,289 - 0.7
293,289 - 0.1
293,289 - 0.6
293,292 + 1.3
293,293 + -3.0
293,307 + 2.4
293,315 - 0.5
293,316 + 0.7
293,321 + 0.9
293,324 + 0.5
293,326 - 0.9
293,450 - 2.0
293,704 - 0.4
294,007 + 1.3
294,008 - 1.1
294,019 + -0.1
294,163 - -0.3
294,174 + -0.1
294,183 + -1.3
294,204 + 0.6
294,320 - 9812 mRNA_1444 0.11 -0.1
294,323 - 9812 mRNA_1444 0.11 1.6
294,485 + 9812 mRNA_1444 0.28 0.4
294,601 - 9812 mRNA_1444 0.41 1.3
294,743 - 9812 mRNA_1444 0.56 0.6
294,744 - 9812 mRNA_1444 0.56 1.9
294,907 - 9812 mRNA_1444 0.73 0.5
295,199 - -0.9
295,613 - 0.0
295,619 - -0.2
295,909 - 0.0
295,931 - 0.0
295,948 - 9813 mRNA_1445 0.10 2.0
295,948 - 9813 mRNA_1445 0.10 0.2