Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1441

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1440: 9808 - Hypothetical Protein, at 284752 to 285459 9808 mRNA_1441: 9809 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 285760 to 287814 9809 mRNA_1442: 9810 - K03549 kup KUP system potassium uptake protein, at 288246 to 290884 9810

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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284,810 - 0.3
285,088 + 9808 mRNA_1440 0.47 0.7
285,092 - 9808 mRNA_1440 0.48 -1.2
285,356 - 9808 mRNA_1440 0.85 0.4
285,645 + -0.9
285,689 + 0.8
285,999 + 9809 mRNA_1441 0.12 1.2
286,087 + 9809 mRNA_1441 0.16 -0.8
286,093 + 9809 mRNA_1441 0.16 0.6
286,109 + 9809 mRNA_1441 0.17 -0.7
286,125 + 9809 mRNA_1441 0.18 1.3
286,456 + 9809 mRNA_1441 0.34 1.8
286,616 - 9809 mRNA_1441 0.42 -1.5
286,686 - 9809 mRNA_1441 0.45 -0.7
286,706 + 9809 mRNA_1441 0.46 -2.4
286,973 + 9809 mRNA_1441 0.59 -0.1
287,300 + 9809 mRNA_1441 0.75 0.6
287,409 - 9809 mRNA_1441 0.80 0.1
287,430 - 9809 mRNA_1441 0.81 0.6
287,738 + 0.5
287,739 + -2.4
287,803 + 2.4
287,852 - -0.4
287,882 + 0.7
287,893 - 0.0
287,915 - 0.4
288,355 + -0.5
288,455 - 0.4
288,470 - -0.2
288,730 + 9810 mRNA_1442 0.18 0.2
288,740 + 9810 mRNA_1442 0.19 0.7
288,752 - 9810 mRNA_1442 0.19 0.8
288,759 + 9810 mRNA_1442 0.19 0.2