Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1359

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302 9727 mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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84,835 - 0.1
84,864 - 0.2
84,865 + 0.4
84,873 + 1.0
84,898 + -0.0
84,902 + 1.6
84,921 + 0.1
84,922 + -0.0
84,923 + 1.0
84,925 - -2.2
84,925 - 0.9
84,934 + -2.2
84,942 - 0.6
85,049 - -1.3
85,051 - 0.3
85,060 - 0.0
85,064 + -0.2
85,087 - -1.0
85,197 - -0.6
85,217 - 0.5
85,217 + -1.8
85,223 + 0.1
85,341 - 1.5
85,358 + 0.1
85,363 - 0.5
85,363 + -0.4
85,369 + -1.4
85,375 - 0.2
85,375 + 0.2
85,376 - 0.5
85,377 + 0.4
85,388 - 2.1
85,399 - 0.4
85,399 + 0.9
85,403 - 0.9
85,404 + -0.2
85,570 - -0.0
85,584 + 1.2
85,602 + 0.2
85,682 + -0.0
85,867 + -0.0
85,873 + -1.5
86,755 + 9727 mRNA_1359 0.39 -0.2
86,836 - 9727 mRNA_1359 0.42 -0.7
87,112 + 9727 mRNA_1359 0.53 0.1
87,145 - 9727 mRNA_1359 0.54 -1.6
87,215 + 9727 mRNA_1359 0.57 -0.9
87,566 + 9727 mRNA_1359 0.71 -0.4
87,587 - 9727 mRNA_1359 0.72 -1.8
87,713 - 9727 mRNA_1359 0.77 -0.7
87,736 + 9727 mRNA_1359 0.78 -0.7
87,769 + 9727 mRNA_1359 0.79 -0.9
88,292 + -1.5
88,298 - -3.1
88,415 - 0.6
88,416 + 1.4
88,434 - 1.0
88,457 - 1.4
88,468 + 0.7
88,568 - -0.6
88,576 - 0.3
88,585 - -0.6
88,603 + -0.1
88,604 - -0.2
88,727 + 0.4
88,736 - -0.5
89,033 - 9728 mRNA_1360 0.27 -0.4
89,050 - 9728 mRNA_1360 0.28 -1.9