Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1348

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1348: 9716 - SUPERFAMILY--SSF52047, at 54968 to 55797 9716 mRNA_1349: 9717 - K12852 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component, at 56192 to 59943 9717

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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54,018 + -1.7
54,024 + -0.0
54,037 - 0.2
54,050 + 0.2
54,059 + 1.0
54,062 - 0.4
54,071 + 0.0
54,192 + 0.2
54,210 + 0.3
54,473 + 0.1
54,480 + 0.3
54,643 - 0.5
54,741 + 1.2
55,054 + 9716 mRNA_1348 0.10 0.6
55,186 - 9716 mRNA_1348 0.26 2.0
55,326 + 9716 mRNA_1348 0.43 -0.6
55,347 - 9716 mRNA_1348 0.46 -1.2
55,443 - 9716 mRNA_1348 0.57 1.4
55,483 + 9716 mRNA_1348 0.62 0.4
55,624 + 9716 mRNA_1348 0.79 0.1
55,742 - -2.0
55,768 - 0.5
55,788 + 1.4
55,905 + 0.3
55,919 - -1.5
55,933 + 1.8
55,945 - -0.3
56,014 + 0.3
56,071 + 1.6
56,083 - -0.5
56,126 - -1.3