Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1325

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1325: 9693 - KOG1960 Predicted RNA-binding protein, contains KH domains, at 934914 to 938027 9693

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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933,927 + 0.5
933,938 - 0.3
933,942 - 2.8
933,984 + -3.1
933,990 - 0.3
934,003 - 0.8
934,284 + -0.1
934,292 - 0.7
934,322 + -1.7
934,378 - 0.9
934,416 - 0.4
934,417 + -0.6
934,701 + 0.3
934,734 + -0.5
934,811 - -3.4
935,144 - 0.3
935,150 + -0.8
935,270 + 9693 mRNA_1325 0.11 0.2
935,275 - 9693 mRNA_1325 0.12 1.5
935,279 - 9693 mRNA_1325 0.12 -0.8
935,390 - 9693 mRNA_1325 0.15 -1.1
935,433 - 9693 mRNA_1325 0.17 3.1
936,305 + 9693 mRNA_1325 0.45 -1.3
936,365 + 9693 mRNA_1325 0.47 0.6
936,430 - 9693 mRNA_1325 0.49 1.7
936,605 - 9693 mRNA_1325 0.54 -1.6
936,730 - 9693 mRNA_1325 0.58 -3.9
936,732 + 9693 mRNA_1325 0.58 -0.4
937,097 + 9693 mRNA_1325 0.70 -2.4
937,386 + 9693 mRNA_1325 0.79 0.9
937,393 + 9693 mRNA_1325 0.80 -0.5
937,498 - 9693 mRNA_1325 0.83 -0.3
937,540 - 9693 mRNA_1325 0.84 0.3
937,569 - 9693 mRNA_1325 0.85 1.3
937,635 + 9693 mRNA_1325 0.87 1.2
937,728 + 0.7
937,741 + 0.2
937,754 - 0.1
937,760 - -1.1
937,763 - 0.2
937,803 + 2.2
937,806 - -2.1
937,832 - 0.4
937,838 - 0.4
937,885 + 0.4
937,898 - 0.9
937,954 - 0.7
938,042 - -1.1
938,046 - 0.3
938,050 - 1.0
938,054 + -0.2
938,058 + 0.0
938,061 - 0.2
938,066 - 0.1
938,073 - 0.0
938,094 - -0.5
938,113 - 0.1
938,116 + -0.7
938,134 + 2.3
938,134 + -0.3
938,136 - -1.1
938,141 - 1.0
938,172 - 0.3
938,177 - 1.0
938,179 - 1.1
938,183 - -0.6
938,186 - 0.0
938,190 - -1.5
938,190 - 0.3
938,190 - 0.1
938,190 - -0.2
938,190 - -0.7