Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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821,706 - 0.6
821,717 - 0.2
821,730 + 1.0
821,744 + 0.2
821,748 + 0.8
821,752 - 0.5
821,755 + 1.1
821,764 + -0.6
821,835 + -0.2
821,887 + -1.0
821,911 + 0.2
821,919 + 0.5
821,919 + -0.7
821,921 + 0.2
821,922 - 1.1
821,923 - 0.5
821,923 + -0.3
821,924 + -0.2
821,927 + 0.2
821,928 + 0.6
821,929 - 1.1
821,931 + 0.2
821,939 - 0.2
821,940 - -1.9
821,941 - 1.0
821,941 + -1.8
821,965 + 0.1
821,970 - -1.1
821,975 - 1.3
821,983 - 0.7
821,996 - 0.5
822,000 - 0.6
822,004 - -0.8
822,005 - 1.1
822,091 - 2.2
822,179 - -0.2
822,180 + 0.5
822,189 - -0.8
822,208 - 0.3
822,214 - 0.5
822,214 - 0.2
822,231 - 0.4
822,235 - 0.1
822,242 + -0.8
822,242 + -2.4
822,249 + 0.8
822,250 + 0.5
822,257 - 0.4
822,259 + 0.7
822,262 + -0.2
822,266 - -0.9
822,375 + 0.5
822,377 + 3.3
823,107 - 9647 mRNA_1279 0.29 0.7
823,108 + 9647 mRNA_1279 0.29 0.1
823,119 + 9647 mRNA_1279 0.30 0.1
823,440 - 9647 mRNA_1279 0.50 -0.0
823,448 + 9647 mRNA_1279 0.50 0.1
823,697 - 9647 mRNA_1279 0.65 -0.3
823,735 + 9647 mRNA_1279 0.68 -0.1
824,015 + 9647 mRNA_1279 0.85 1.4
824,386 - 4.0
824,792 - -1.6
824,796 + 0.2
824,800 + 2.5
824,821 + 2.2
824,821 + -0.8
824,866 + -0.4
824,874 - -1.1
824,874 + 1.9
824,894 + -1.3
825,013 + 0.6
825,046 - 0.5
825,053 + 0.3
825,054 - 0.4
825,095 - 0.5
825,116 - -0.6
825,141 + 2.2
825,141 + -0.5
825,178 - -0.9
825,184 - 0.3
825,190 + -0.3
825,191 - -1.4
825,193 - 0.2
825,198 + -1.6
825,200 - -0.7
825,206 + 0.1
825,211 + 0.5
825,211 + 1.4
825,224 - -0.5
825,241 - -1.0
825,243 + 0.9
825,244 - 0.1
825,245 - 0.2