Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1164

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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551,802 - -0.2
551,900 - 0.4
552,323 + 0.4
552,338 - -0.1
552,354 + 0.1
552,650 + 0.3
552,697 - 1.0
552,701 + 1.8
552,761 + 9532 mRNA_1164 0.20 -0.2
552,777 - 9532 mRNA_1164 0.27 -0.3
552,788 - 9532 mRNA_1164 0.31 2.4
552,789 - 9532 mRNA_1164 0.31 0.3
552,824 + 9532 mRNA_1164 0.45 0.2
552,848 - 9532 mRNA_1164 0.55 -0.2
552,853 + 9532 mRNA_1164 0.57 -0.5
553,116 - -0.3
553,137 - -1.7
553,157 + 0.3
553,161 + 1.1
553,270 + -0.1
553,272 - 1.1
553,435 - 3.2
553,528 - 9533 mRNA_1165 0.14 0.0
553,595 - 9533 mRNA_1165 0.21 -0.1
553,726 + 9533 mRNA_1165 0.34 -0.2
553,732 - 9533 mRNA_1165 0.35 0.8