Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_940

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_939: 9307 - Hypothetical Protein, at 23746 to 25185 9307 mRNA_940: 9308 - Hypothetical Protein, at 25419 to 26964 9308 mRNA_941: 9309 - HMMPfam-Calcineurin-like phosphoesterase-PF00149,SUPERFAMILY--SSF56300, at 27276 to 29421 9309

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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24,487 + 9307 mRNA_939 0.51 1.0
24,538 - 9307 mRNA_939 0.55 0.6
24,633 + 9307 mRNA_939 0.62 1.3
24,682 - 9307 mRNA_939 0.65 -0.1
24,763 + 9307 mRNA_939 0.71 2.6
24,807 + 9307 mRNA_939 0.74 0.1
24,928 + 9307 mRNA_939 0.82 2.4
24,976 - 9307 mRNA_939 0.85 1.1
25,080 - -0.0
25,109 - 0.7
25,206 + 0.2
25,346 - 1.3
25,350 + 0.1
25,432 + 0.2
25,445 + -0.6
25,484 - 1.1
25,486 - -0.4
25,492 + -0.6
25,673 - 9308 mRNA_940 0.16 0.7
25,673 - 9308 mRNA_940 0.16 0.8
25,709 - 9308 mRNA_940 0.19 0.7
25,836 + 9308 mRNA_940 0.27 -0.5
25,839 - 9308 mRNA_940 0.27 -0.4
25,876 - 9308 mRNA_940 0.30 0.4
26,089 - 9308 mRNA_940 0.43 1.1
26,104 + 9308 mRNA_940 0.44 0.4
26,116 + 9308 mRNA_940 0.45 -1.2
26,188 - 9308 mRNA_940 0.50 0.2
26,189 - 9308 mRNA_940 0.50 -0.1
26,195 + 9308 mRNA_940 0.50 1.0
26,379 + 9308 mRNA_940 0.62 -0.3
26,433 - 9308 mRNA_940 0.66 0.1
26,439 - 9308 mRNA_940 0.66 0.2
26,441 - 9308 mRNA_940 0.66 -1.3
26,457 - 9308 mRNA_940 0.67 0.4
26,516 - 9308 mRNA_940 0.71 1.3
26,556 + 9308 mRNA_940 0.74 -1.1
26,560 + 9308 mRNA_940 0.74 -0.2
26,561 - 9308 mRNA_940 0.74 0.5
26,566 + 9308 mRNA_940 0.74 0.2
26,619 + 9308 mRNA_940 0.78 1.4
26,629 + 9308 mRNA_940 0.78 0.2
26,672 - 9308 mRNA_940 0.81 -0.1
26,727 + 9308 mRNA_940 0.85 2.0
26,727 - 9308 mRNA_940 0.85 0.0
26,727 - 9308 mRNA_940 0.85 0.9
26,728 + 9308 mRNA_940 0.85 -0.5
26,820 + -0.4
26,822 + -0.2
26,866 - 1.8
26,869 + 0.4
26,891 + 0.5
26,960 - -0.2
27,001 - -0.0
27,021 + 0.2
27,021 - 0.4
27,025 - -0.4
27,025 - 0.6
27,074 - -0.0
27,119 + -0.8
27,156 - -0.4
27,159 - -0.2
27,197 + 1.5
27,409 - 0.5
27,417 - 0.3
27,443 - 0.6
27,447 - 0.1
27,470 - 0.1
27,507 + 9309 mRNA_941 0.11 -2.1
27,559 + 9309 mRNA_941 0.13 0.8
27,562 - 9309 mRNA_941 0.13 -0.3