Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1 + 1.4
1 + -0.2
1 + 1.5
1 + 1.0
1 + 0.2
2 + 0.6
2 + 0.4
5 + 0.4
18 + -0.1
30 + 0.9
37 + -0.1
37 + 1.3
41 + -0.2
42 + -0.5
44 + 0.4
49 + -0.2
49 + 1.7
50 + 0.7
54 + 0.7
58 - 0.6
60 - 0.6
60 + 0.3
60 - -0.7
61 - 1.3
61 + -2.5
63 + 1.8
63 + -0.5
63 + -0.3
63 + 1.6
63 + 1.5
63 + 0.3
64 + 0.7
66 - -0.4
66 + -1.3
70 + 0.7
70 + -0.1
70 - 0.7
71 + -2.4
73 + 0.5
75 - -1.2
77 - -2.1
78 + 0.5
78 - -1.5
78 + -1.1
78 + -1.2
78 + -0.3
78 + -0.0
78 + 0.4
78 + -0.5
78 + -0.4
79 + -0.4
81 - 1.6
81 - 2.7
82 + 0.9
85 + 2.0
104 + 0.8
126 + -0.5
126 + -0.8
128 - 0.9
135 + 0.1
142 + -0.6
150 + 0.6
154 + -0.7
157 + 1.1
171 - -1.3
171 + -1.2
172 + 0.8
172 + 1.3
175 - 1.1
176 - 0.6
177 - 2.7
177 - 0.1
191 - 0.3
192 + 1.5
192 + -0.1
192 + 0.0
193 + 0.6
193 + -1.2
193 + 0.6
198 - -0.4
218 + -0.0
225 + -1.2
235 + 1.5
242 + 1.2
263 - 0.2
293 + 1.1
303 + 0.3
333 - -0.0
339 - -0.3
348 + 1.0
349 + 0.8
377 - 1.2
381 - -0.4
469 + -3.2
487 - 9298 mRNA_930 0.10 -0.2
722 + 9298 mRNA_930 0.29 0.4
1,641 - 0.1
1,656 - -1.1
1,768 - 0.2
1,778 - 0.9
1,794 + 0.3