Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_917

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_917: 9285 - Hypothetical Protein, at 2190561 to 2191088 9285 mRNA_918: 9286 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 2191363 to 2192706 9286

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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2,189,931 - -1.0
2,190,225 + 0.4
2,190,386 - -1.1
2,190,410 + -3.2
2,190,528 - 0.3
2,190,533 + 2.5
2,190,701 - 9285 mRNA_917 0.27 0.4
2,190,704 + 9285 mRNA_917 0.27 1.2
2,190,714 + 9285 mRNA_917 0.29 0.1
2,190,714 - 9285 mRNA_917 0.29 0.3
2,190,719 - 9285 mRNA_917 0.30 -0.1
2,190,721 + 9285 mRNA_917 0.30 -0.7
2,190,748 + 9285 mRNA_917 0.35 -3.2
2,190,768 - 9285 mRNA_917 0.39 -0.4
2,190,854 - 9285 mRNA_917 0.55 0.7
2,191,008 + 9285 mRNA_917 0.85 0.3
2,191,018 - 9285 mRNA_917 0.87 -0.4
2,191,048 + -1.2
2,191,135 - -0.2
2,191,190 + 0.4
2,191,210 - 0.3
2,191,214 - 1.2
2,191,215 - 0.9
2,191,297 - 0.3
2,191,318 + 1.0
2,191,337 - -0.1
2,191,395 + 0.2
2,191,395 + -1.2
2,191,400 + -0.1
2,191,403 - -0.4
2,191,776 + 9286 mRNA_918 0.31 1.4
2,191,818 - 9286 mRNA_918 0.34 -0.6
2,191,894 + 9286 mRNA_918 0.40 -0.5
2,191,910 - 9286 mRNA_918 0.41 0.4
2,191,932 + 9286 mRNA_918 0.42 -0.4
2,191,962 + 9286 mRNA_918 0.45 0.7
2,191,992 - 9286 mRNA_918 0.47 0.2
2,192,034 - 9286 mRNA_918 0.50 0.1
2,192,059 - 9286 mRNA_918 0.52 -0.6