Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_908

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_907: 9275 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 2170887 to 2172443 9275 mRNA_908: 9276 - Hypothetical Protein, at 2172531 to 2173610 9276 mRNA_909: 9277 - KOG0254 Predicted transporter (major facilitator superfamily), at 2173901 to 2176309 9277

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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2,171,834 - 9275 mRNA_907 0.61 0.3
2,171,872 + 9275 mRNA_907 0.63 1.3
2,172,568 - 1.0
2,172,730 + 9276 mRNA_908 0.18 0.9
2,172,731 - 9276 mRNA_908 0.19 -1.2
2,172,737 + 9276 mRNA_908 0.19 0.1
2,172,740 + 9276 mRNA_908 0.19 0.3
2,172,742 - 9276 mRNA_908 0.20 -0.3
2,172,746 + 9276 mRNA_908 0.20 1.2
2,172,751 - 9276 mRNA_908 0.20 0.0
2,172,763 + 9276 mRNA_908 0.21 1.5
2,172,766 + 9276 mRNA_908 0.22 -0.5
2,172,772 + 9276 mRNA_908 0.22 0.4
2,172,780 + 9276 mRNA_908 0.23 1.3
2,172,784 + 9276 mRNA_908 0.23 1.1
2,172,786 - 9276 mRNA_908 0.24 0.1
2,172,787 - 9276 mRNA_908 0.24 -0.9
2,172,788 + 9276 mRNA_908 0.24 0.7
2,172,794 + 9276 mRNA_908 0.24 1.0
2,172,801 + 9276 mRNA_908 0.25 0.1
2,172,918 - 9276 mRNA_908 0.36 0.9
2,172,934 - 9276 mRNA_908 0.37 0.3
2,173,039 - 9276 mRNA_908 0.47 1.0
2,173,079 + 9276 mRNA_908 0.51 0.6
2,173,346 - 9276 mRNA_908 0.75 1.3
2,173,362 - 9276 mRNA_908 0.77 0.1
2,173,778 + 0.6
2,173,781 - 0.6
2,174,501 + 9277 mRNA_909 0.25 -0.4