Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_885

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_884: 9252 - Hypothetical Protein, at 2111013 to 2111465 9252 mRNA_885: 9253 - K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12, at 2111584 to 2117077 9253 mRNA_886: 9254 - KOG2504 Monocarboxylate transporter, at 2117590 to 2119437 9254

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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2,111,003 + 0.9
2,111,048 - -0.2
2,111,160 - 9252 mRNA_884 0.32 -0.2
2,111,272 + 9252 mRNA_884 0.57 0.3
2,111,379 + 9252 mRNA_884 0.81 -0.2
2,111,487 - -0.4
2,112,003 + 1.2
2,112,022 + -0.1
2,112,112 - -0.6
2,112,224 + 9253 mRNA_885 0.12 1.2
2,112,351 - 9253 mRNA_885 0.14 1.1
2,112,378 + 9253 mRNA_885 0.14 1.1
2,113,002 + 9253 mRNA_885 0.26 0.1
2,113,033 - 9253 mRNA_885 0.26 0.2
2,113,038 - 9253 mRNA_885 0.26 0.8
2,113,336 - 9253 mRNA_885 0.32 0.7
2,113,634 - 9253 mRNA_885 0.37 0.5
2,113,637 - 9253 mRNA_885 0.37 0.9
2,113,832 + 9253 mRNA_885 0.41 0.7
2,114,135 - 9253 mRNA_885 0.46 1.7
2,114,205 - 9253 mRNA_885 0.48 0.3
2,114,287 + 9253 mRNA_885 0.49 0.6
2,114,545 + 9253 mRNA_885 0.54 1.0
2,114,563 - 9253 mRNA_885 0.54 -1.0
2,114,735 - 9253 mRNA_885 0.57 -0.4
2,114,859 - 9253 mRNA_885 0.60 -0.1
2,115,018 - 9253 mRNA_885 0.63 2.0
2,115,071 + 9253 mRNA_885 0.63 0.5
2,115,128 - 9253 mRNA_885 0.65 1.1
2,115,133 + 9253 mRNA_885 0.65 1.3
2,115,164 + 9253 mRNA_885 0.65 0.8
2,115,170 + 9253 mRNA_885 0.65 0.8
2,115,437 + 9253 mRNA_885 0.70 0.2
2,115,459 + 9253 mRNA_885 0.71 -1.4
2,115,645 + 9253 mRNA_885 0.74 -0.7
2,115,769 - 9253 mRNA_885 0.76 -0.3
2,115,893 - 9253 mRNA_885 0.78 0.4
2,116,195 - 9253 mRNA_885 0.84 -0.2
2,116,302 - 9253 mRNA_885 0.86 -0.7
2,116,331 - 9253 mRNA_885 0.86 1.0
2,116,521 + 9253 mRNA_885 0.90 0.7
2,116,759 + 1.3
2,116,967 + 1.0
2,117,071 + -1.4
2,117,094 + 0.6
2,117,285 + 1.0
2,117,312 - 1.0
2,117,328 + -0.5
2,117,362 + 2.4
2,117,377 + 1.2
2,117,387 + 0.4
2,117,387 + -0.4
2,117,391 - 1.4
2,117,395 + -0.5
2,117,396 + 0.8
2,117,409 - -1.6
2,117,415 + -0.1
2,117,509 - -0.1
2,117,549 - 1.6
2,117,586 + -0.1
2,117,592 - 1.1
2,117,594 - 0.8
2,117,608 + 0.5
2,117,609 + 1.0
2,117,691 + -1.3
2,117,708 + 0.6
2,117,716 + 0.1
2,117,830 + 9254 mRNA_886 0.13 0.3
2,117,908 - 9254 mRNA_886 0.17 -0.3
2,117,917 + 9254 mRNA_886 0.18 0.8