Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_665

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_664: 9032 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,SUPERFAMILY--SSF51197, at 1596651 to 1602461 9032 mRNA_665: 9033 - K08853 AAK AP2-associated kinase, at 1602722 to 1607021 9033 mRNA_666: 9034 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1607082 to 1608088 9034

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,602,088 - -1.6
1,602,184 - 1.6
1,602,199 - -0.5
1,602,214 + -0.1
1,602,226 + 1.5
1,602,239 + -0.5
1,602,525 - -0.3
1,602,662 - 0.5
1,602,672 + -0.2
1,602,674 + 1.2
1,602,932 + -1.1
1,603,828 - 9033 mRNA_665 0.26 -5.4
1,603,832 + 9033 mRNA_665 0.26 -4.5
1,604,097 + 9033 mRNA_665 0.32 0.0
1,604,731 - 9033 mRNA_665 0.47 -0.8
1,605,023 - 9033 mRNA_665 0.54 -0.1
1,606,306 + 9033 mRNA_665 0.83 0.9
1,607,148 - 0.9
1,607,636 + 9034 mRNA_666 0.55 -0.2
1,607,775 - 9034 mRNA_666 0.69 1.8
1,607,926 - 9034 mRNA_666 0.84 -0.8