Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_560

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_560: 8928 - Hypothetical Protein, at 1336484 to 1340949 8928 mRNA_561: 8929 - Hypothetical Protein, at 1341305 to 1346099 8929

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,335,496 + 0.3
1,335,576 - 3.1
1,335,800 - 0.9
1,336,043 - -1.5
1,336,103 - 1.7
1,336,135 - -3.7
1,336,166 - -1.9
1,336,325 + 0.4
1,336,325 - 0.8
1,336,477 + -0.1
1,336,942 + 8928 mRNA_560 0.10 -0.5
1,336,966 - 8928 mRNA_560 0.11 1.5
1,337,129 + 8928 mRNA_560 0.14 -0.1
1,337,214 + 8928 mRNA_560 0.16 0.1
1,337,225 - 8928 mRNA_560 0.17 -1.4
1,337,230 + 8928 mRNA_560 0.17 -1.6
1,337,510 - 8928 mRNA_560 0.23 -0.1
1,338,183 - 8928 mRNA_560 0.38 1.2
1,338,517 + 8928 mRNA_560 0.46 0.2
1,338,714 - 8928 mRNA_560 0.50 -0.1
1,339,419 + 8928 mRNA_560 0.66 1.1
1,339,442 + 8928 mRNA_560 0.66 1.5
1,339,536 - 8928 mRNA_560 0.68 -0.2
1,339,568 + 8928 mRNA_560 0.69 0.4
1,339,743 - 8928 mRNA_560 0.73 -2.6
1,339,844 + 8928 mRNA_560 0.75 -2.2
1,340,322 + 8928 mRNA_560 0.86 1.4
1,340,584 + 1.8
1,340,595 + -0.9
1,340,626 - 1.3
1,340,641 + 0.5
1,340,803 - -0.3
1,341,004 + 0.3
1,341,071 - 0.6
1,341,093 + -0.6
1,341,148 - 0.0
1,341,162 - -0.0
1,341,209 - 0.6
1,341,593 - 0.3
1,341,744 - 0.3
1,341,867 - 8929 mRNA_561 0.12 0.2