Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_424

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_423: 8791 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 985910 to 986810 8791 mRNA_424: 8792 - HMMPfam-Diaphanous GTPase-binding Domain-PF06371,SUPERFAMILY--SSF48371, at 987368 to 990699 8792 mRNA_425: 8793 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 991145 to 992451 8793

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
986,551 - 8791 mRNA_423 0.71 -0.4
986,663 - 8791 mRNA_423 0.84 -2.4
986,698 - 8791 mRNA_423 0.87 -1.2
986,935 - -1.6
986,945 - 1.2
986,956 + -0.1
986,964 + 1.4
986,989 - -0.7
987,122 - -0.5
987,132 - -2.1
987,154 + -0.5
987,189 - -0.1
987,290 + -1.4
987,306 - -1.6
987,335 + 0.2
987,381 - 1.0
987,442 + 1.4
987,563 - -3.3
987,717 - 8792 mRNA_424 0.10 0.3
987,728 - 8792 mRNA_424 0.11 0.5
987,749 - 8792 mRNA_424 0.11 -1.6
988,307 + 8792 mRNA_424 0.28 -0.1
988,497 - 8792 mRNA_424 0.34 -1.8
988,535 - 8792 mRNA_424 0.35 -0.3
988,633 + 8792 mRNA_424 0.38 0.6
988,935 - 8792 mRNA_424 0.47 1.8
989,211 + 8792 mRNA_424 0.55 0.8
989,308 + 8792 mRNA_424 0.58 -0.5
989,375 - 8792 mRNA_424 0.60 -0.3
989,667 - 8792 mRNA_424 0.69 1.9
989,805 - 8792 mRNA_424 0.73 -0.4
990,071 + 8792 mRNA_424 0.81 -1.8
990,163 + 8792 mRNA_424 0.84 1.4
990,201 + 8792 mRNA_424 0.85 1.5
990,342 - 8792 mRNA_424 0.89 0.8
990,635 + 2.2
990,768 - -0.1
991,085 - 0.9
991,134 - 0.2
991,212 - 1.5
991,236 + 0.4
991,475 - 8793 mRNA_425 0.25 0.3
991,507 + 8793 mRNA_425 0.28 0.9