Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_50

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_49: 8417 - K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B, at 117701 to 118562 8417 mRNA_50: 8418 - KOG1611 Predicted short chain-type dehydrogenase, at 118975 to 119840 8418 mRNA_51: 8419 - K10392 KIF1 kinesin family member 1, at 120072 to 126065 8419

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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118,675 - 0.9
118,684 + 0.6
118,823 - 2.0
118,865 + 1.6
118,874 + 0.3
118,985 - 0.6
119,302 + 8418 mRNA_50 0.38 0.1
119,387 - 8418 mRNA_50 0.48 -1.4
119,413 + 8418 mRNA_50 0.51 0.3
119,416 - 8418 mRNA_50 0.51 1.0
119,416 - 8418 mRNA_50 0.51 0.6
119,417 - 8418 mRNA_50 0.51 -0.1
119,422 + 8418 mRNA_50 0.52 -0.0
119,422 + 8418 mRNA_50 0.52 -0.5
119,600 + 8418 mRNA_50 0.72 0.7
119,707 - 8418 mRNA_50 0.85 1.0
119,957 + -0.2
120,035 + -0.1
120,142 - -0.1
120,383 + 1.4
120,401 - -0.1
120,434 - -1.1
120,549 + -0.3
120,695 - 8419 mRNA_51 0.10 0.5
120,744 + 8419 mRNA_51 0.11 -0.7