Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1: 8369 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1571 to 2453 8369 mRNA_2: 8370 - PRINTS-Proline rich extensin signature-PR01217, at 3233 to 7809 8370 mRNA_3: 8371 - K15161 CCNC, SSN8 cyclin C, at 8155 to 10023 8371

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
2,268 + 8369 mRNA_1 0.79 1.1
2,361 - 8369 mRNA_1 0.89 -3.3
2,441 + -2.2
2,550 + 0.2
2,552 - -1.0
2,564 + 0.0
2,701 + -0.8
2,839 - 0.2
2,853 + -0.7
2,946 - -1.5
3,005 - -1.0
3,125 - -0.5
3,136 + -0.5
5,042 - 8370 mRNA_2 0.40 -0.7
5,788 - 8370 mRNA_2 0.56 -3.1
7,143 + 8370 mRNA_2 0.85 -2.0
7,817 - 0.6
7,865 + -3.6
7,991 + 0.3
8,148 - -3.4
8,150 - -2.3
8,205 - 1.6
8,285 + -0.3
8,396 + 8371 mRNA_3 0.13 1.0
8,694 - 8371 mRNA_3 0.29 0.9
8,707 + 8371 mRNA_3 0.30 -2.8