Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8370

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8369: 16737 - HMMPfam-Transient receptor potential (TRP) ion channel-PF06011, at 1050307 to 1054065 16737 mRNA_8370: 16738 - K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2, at 1054489 to 1055817 16738 mRNA_8371: 16739 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 1055987 to 1057436 16739

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,053,710 + 1.1
1,053,722 + -0.5
1,054,153 - 2.6
1,054,158 - 2.2
1,054,162 + -0.1
1,054,178 - 1.9
1,054,294 + 0.5
1,054,300 + 2.1
1,054,610 - 0.6
1,054,648 - 16738 mRNA_8370 0.12 1.2
1,055,139 - 16738 mRNA_8370 0.49 0.8
1,055,205 + 16738 mRNA_8370 0.54 1.2
1,055,485 + 16738 mRNA_8370 0.75 1.4
1,056,813 - 16739 mRNA_8371 0.57 0.8