Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7977

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7976: 16344 - BLAST carbohydrate-binding module family 13 protein [Schizo..., at 131943 to 133643 16344 mRNA_7977: 16345 - K17757 CARKD ATP-dependent NAD(P)H-hydrate dehydratase, at 134234 to 135920 16345 mRNA_7978: 16346 - K13341 PEX7, PTS2R peroxin-7, at 136245 to 137738 16346

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
133,458 - 16344 mRNA_7976 0.89 0.6
133,574 + -0.7
133,764 + -1.9
133,801 + -0.5
133,804 - 0.0
133,809 - 0.5
133,819 + 0.1
133,842 + 1.5
133,851 + 1.4
133,903 + 0.4
133,963 - 0.4
134,017 - -0.8
134,041 - 2.3
134,051 + -0.0
134,051 + -0.1
134,068 - 0.4
134,085 - 0.1
134,101 - 1.4
134,103 - -0.8
134,111 + -0.8
134,118 - -0.6
134,126 - 0.5
134,126 - -0.4
134,128 + 0.3
134,130 - 0.8
134,130 - 0.4
134,132 - 0.3
134,132 - 0.7
134,134 - 1.4
134,136 - -0.2
134,148 + 1.2
134,148 + -0.2
134,148 + -1.1
134,149 + 2.3
134,153 - -0.7
134,155 + 1.0
134,301 - 0.2
134,453 + 16345 mRNA_7977 0.13 1.0
134,855 + 16345 mRNA_7977 0.37 0.4
134,873 - 16345 mRNA_7977 0.38 0.4
135,003 + 16345 mRNA_7977 0.46 -1.4
135,031 - 16345 mRNA_7977 0.47 -0.6
135,439 + 16345 mRNA_7977 0.71 1.6
135,469 + 16345 mRNA_7977 0.73 1.4
136,191 + 2.1
136,197 + 0.5
136,354 + 0.0
136,527 - 16346 mRNA_7978 0.19 -0.3
136,792 + 16346 mRNA_7978 0.37 -1.7