Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7968

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7967: 16335 - Hypothetical Protein, at 112365 to 112943 16335 mRNA_7968: 16336 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 112971 to 114201 16336 mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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112,224 + 1.3
112,225 + 0.3
112,239 - 0.7
112,275 + 1.8
112,360 - 0.9
112,520 + 16335 mRNA_7967 0.27 -0.1
112,520 - 16335 mRNA_7967 0.27 0.1
112,539 + 16335 mRNA_7967 0.30 0.7
112,539 + 16335 mRNA_7967 0.30 0.3
112,662 + 16335 mRNA_7967 0.51 1.1
112,677 - 16335 mRNA_7967 0.54 0.9
112,678 + 16335 mRNA_7967 0.54 0.1
112,816 - 16335 mRNA_7967 0.78 1.6
112,820 - 16335 mRNA_7967 0.79 1.1
112,999 + 0.6
113,203 + 16336 mRNA_7968 0.19 -0.1
113,231 + 16336 mRNA_7968 0.21 1.7
113,255 - 16336 mRNA_7968 0.23 1.3
113,255 - 16336 mRNA_7968 0.23 0.4
113,257 - 16336 mRNA_7968 0.23 0.2
113,286 + 16336 mRNA_7968 0.26 1.5
113,286 + 16336 mRNA_7968 0.26 -0.5
113,286 + 16336 mRNA_7968 0.26 -2.1
113,429 + 16336 mRNA_7968 0.37 0.8
113,442 - 16336 mRNA_7968 0.38 0.6
113,502 - 16336 mRNA_7968 0.43 -0.7
113,508 - 16336 mRNA_7968 0.44 -0.6
113,532 + 16336 mRNA_7968 0.46 1.1
113,564 - 16336 mRNA_7968 0.48 1.3
113,567 + 16336 mRNA_7968 0.48 0.5
113,568 - 16336 mRNA_7968 0.48 3.0
113,576 + 16336 mRNA_7968 0.49 1.2
113,590 - 16336 mRNA_7968 0.50 0.0
113,649 + 16336 mRNA_7968 0.55 1.7
113,690 - 16336 mRNA_7968 0.58 1.4
113,792 - 16336 mRNA_7968 0.67 0.8
113,860 - 16336 mRNA_7968 0.72 -1.2
113,919 + 16336 mRNA_7968 0.77 0.6
113,979 + 16336 mRNA_7968 0.82 -1.7
113,981 - 16336 mRNA_7968 0.82 -0.5
113,983 + 16336 mRNA_7968 0.82 -1.8
113,983 - 16336 mRNA_7968 0.82 -0.0
113,998 + 16336 mRNA_7968 0.83 -0.1
114,069 - 16336 mRNA_7968 0.89 -0.8
114,162 - 0.2
114,185 - 0.6
114,185 - 0.1
114,188 - 0.2
114,257 + 1.0
114,260 + 0.7
114,323 - 0.6
114,377 + 1.4
114,384 - -0.5
114,530 + 0.2
114,531 + -0.6
114,647 + 0.3
114,651 - -2.0
114,724 - 16337 mRNA_7969 0.11 0.2
114,731 + 16337 mRNA_7969 0.13 1.3
114,760 - 16337 mRNA_7969 0.18 0.5
114,840 - 16337 mRNA_7969 0.31 -1.2
114,980 - 16337 mRNA_7969 0.55 -0.0
114,998 - 16337 mRNA_7969 0.58 -0.2
115,000 - 16337 mRNA_7969 0.58 1.5
115,078 - 16337 mRNA_7969 0.72 -1.0
115,087 - 16337 mRNA_7969 0.73 2.3
115,087 + 16337 mRNA_7969 0.73 2.0
115,090 - 16337 mRNA_7969 0.74 -0.7
115,093 - 16337 mRNA_7969 0.74 0.9
115,182 + 16337 mRNA_7969 0.89 1.8