Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7946

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7945: 16313 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 70630 to 71509 16313 mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71933 to 72812 16314 mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73248 to 74114 16315

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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70,955 + 16313 mRNA_7945 0.37 0.9
70,974 - 16313 mRNA_7945 0.39 0.8
70,989 + 16313 mRNA_7945 0.41 0.1
71,000 - 16313 mRNA_7945 0.42 0.2
71,117 - 16313 mRNA_7945 0.55 1.9
71,235 + 16313 mRNA_7945 0.69 1.8
71,412 - 16313 mRNA_7945 0.89 -1.8
71,421 + 16313 mRNA_7945 0.90 1.9
71,534 - 0.3
71,580 - 1.1
71,586 + 0.5
71,601 + -0.9
72,077 - 16314 mRNA_7946 0.16 0.0
72,112 - 16314 mRNA_7946 0.20 2.0
72,118 - 16314 mRNA_7946 0.21 -1.3
72,225 + 16314 mRNA_7946 0.33 -0.9
72,297 + 16314 mRNA_7946 0.41 -0.3
72,304 + 16314 mRNA_7946 0.42 0.9
72,322 + 16314 mRNA_7946 0.44 2.8
72,414 - 16314 mRNA_7946 0.55 1.3
72,415 + 16314 mRNA_7946 0.55 0.9
72,433 + 16314 mRNA_7946 0.57 0.0
72,450 + 16314 mRNA_7946 0.59 1.1
72,471 - 16314 mRNA_7946 0.61 1.6
72,506 - 16314 mRNA_7946 0.65 0.2
72,571 + 16314 mRNA_7946 0.72 0.4
72,573 - 16314 mRNA_7946 0.73 0.4
72,579 - 16314 mRNA_7946 0.73 0.5
72,580 + 16314 mRNA_7946 0.74 0.3
72,740 - 1.4
72,815 + 1.1
72,859 + 0.1
72,903 - 1.1
72,907 - 0.2
73,058 + 0.6
73,063 - 1.2
73,074 + 1.2
73,187 - 0.1
73,222 + -1.4
73,236 + 0.3
73,339 + 16315 mRNA_7947 0.10 0.0
73,340 - 16315 mRNA_7947 0.11 0.9
73,357 - 16315 mRNA_7947 0.13 0.5
73,529 - 16315 mRNA_7947 0.32 -2.5
73,530 + 16315 mRNA_7947 0.33 -0.5
73,537 + 16315 mRNA_7947 0.33 0.1
73,779 - 16315 mRNA_7947 0.61 1.7
73,805 + 16315 mRNA_7947 0.64 1.1