Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7904

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7903: 16271 - K14810 DDX56, DBP9 ATP-dependent RNA helicase DDX56/DBP9, at 1339819 to 1342318 16271 mRNA_7904: 16272 - Hypothetical Protein, at 1342830 to 1343789 16272 mRNA_7905: 16273 - K00147 proA glutamate-5-semialdehyde dehydrogenase, at 1344206 to 1345846 16273

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,342,270 + -1.2
1,342,314 + 1.5
1,342,563 - 0.3
1,342,689 + 1.4
1,342,848 + 1.3
1,342,962 + 16272 mRNA_7904 0.14 -0.7
1,342,965 - 16272 mRNA_7904 0.14 1.0
1,342,977 - 16272 mRNA_7904 0.15 0.0
1,342,983 - 16272 mRNA_7904 0.16 1.0
1,343,039 + 16272 mRNA_7904 0.22 2.6
1,343,142 - 16272 mRNA_7904 0.33 -0.4
1,343,142 + 16272 mRNA_7904 0.33 2.4
1,343,274 - 16272 mRNA_7904 0.46 0.3
1,343,565 - 16272 mRNA_7904 0.77 0.2
1,343,571 - 16272 mRNA_7904 0.77 -0.3
1,343,669 + 16272 mRNA_7904 0.87 0.4
1,343,705 - 0.9
1,343,725 + -0.7
1,343,730 + -0.1
1,343,817 - -0.1
1,343,820 + 1.1
1,343,845 + -0.8
1,343,847 - 0.5
1,343,869 + -1.2
1,343,901 - -1.5
1,344,107 - -0.1
1,344,120 - -0.0
1,344,122 - 1.1
1,344,125 + -0.2
1,344,128 - 0.7
1,344,138 - 2.1
1,344,146 - -1.6
1,344,163 - -0.0
1,344,167 + 0.2
1,344,614 - 16273 mRNA_7905 0.25 -4.0