Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7804

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1108801 to 1111238 16171 mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1111520 to 1112833 16172 mRNA_7805: 16173 - K12389 BTS, CLN3 battenin, at 1113037 to 1115028 16173

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,111,009 - -0.4
1,111,319 - 0.1
1,111,456 - 3.1
1,111,456 - 0.0
1,111,465 - -0.3
1,111,474 - -0.1
1,111,487 - 0.6
1,111,625 - -1.0
1,111,629 - 1.2
1,111,633 + 0.5
1,111,640 + 2.0
1,111,766 - 16172 mRNA_7804 0.19 1.4
1,111,783 + 16172 mRNA_7804 0.20 -0.0
1,111,898 - 16172 mRNA_7804 0.29 0.8
1,111,904 - 16172 mRNA_7804 0.29 0.0
1,111,914 + 16172 mRNA_7804 0.30 0.0
1,112,049 - 16172 mRNA_7804 0.40 1.0
1,112,354 - 16172 mRNA_7804 0.63 -0.8
1,112,463 + 16172 mRNA_7804 0.72 0.0
1,112,466 + 16172 mRNA_7804 0.72 0.8
1,112,914 - -2.0
1,112,933 + -0.8
1,112,936 - 1.8
1,112,942 - 0.3
1,112,961 + -2.0
1,113,548 + 16173 mRNA_7805 0.26 0.1
1,113,651 - 16173 mRNA_7805 0.31 1.6
1,113,676 + 16173 mRNA_7805 0.32 -0.1
1,113,828 + 16173 mRNA_7805 0.40 0.1